Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp6P0C0A3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm11511-201ENSMUST00000118146 540 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm16505-201ENSMUST00000179981 232 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Mir6927-201ENSMUST00000184494 71 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm18893-201ENSMUST00000198416 943 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp6P0C0A3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Mir7677-201ENSMUST00000184226 67 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gm43184-201ENSMUST00000197247 542 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp6P0C0A3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.77□□□□□ -0.36
Chmp6P0C0A3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.77□□□□□ -0.36
Chmp6P0C0A3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms