Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igh-VJ558P01758 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Erich3-203ENSMUST00000189969 3460 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm14724-201ENSMUST00000118400 537 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm8815-201ENSMUST00000173809 620 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm43966-201ENSMUST00000203301 612 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm8385-201ENSMUST00000058999 643 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igh-VJ558P01758 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm14208-201ENSMUST00000119645 678 ntBASIC10.1□□□□□ -0.79
Igh-VJ558P01758 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm12196-201ENSMUST00000120954 262 ntBASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms