Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.07□□□□□ -0.48
CopeO89079 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.07□□□□□ -0.48
CopeO89079 Gm27514-201ENSMUST00000183692 110 ntBASIC12.07□□□□□ -0.48
CopeO89079 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.07□□□□□ -0.48
CopeO89079 Gm9230-201ENSMUST00000188228 532 ntBASIC12.07□□□□□ -0.48
CopeO89079 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CopeO89079 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.07□□□□□ -0.48
CopeO89079 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.07□□□□□ -0.48
CopeO89079 Gm38158-201ENSMUST00000194617 339 ntBASIC12.07□□□□□ -0.48
CopeO89079 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.07□□□□□ -0.48
CopeO89079 Gm19287-201ENSMUST00000203190 358 ntBASIC12.07□□□□□ -0.48
CopeO89079 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.07□□□□□ -0.48
CopeO89079 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.07□□□□□ -0.48
CopeO89079 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CopeO89079 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
CopeO89079 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CopeO89079 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Gm25214-201ENSMUST00000104573 129 ntBASIC12.06□□□□□ -0.48
CopeO89079 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.06□□□□□ -0.48
CopeO89079 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.06□□□□□ -0.48
CopeO89079 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.06□□□□□ -0.48
CopeO89079 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.06□□□□□ -0.48
CopeO89079 Gm43133-201ENSMUST00000197472 463 ntBASIC12.06□□□□□ -0.48
CopeO89079 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Gm10312-201ENSMUST00000078515 489 ntBASIC12.06□□□□□ -0.48
CopeO89079 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.06□□□□□ -0.48
CopeO89079 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.06□□□□□ -0.48
CopeO89079 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CopeO89079 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopeO89079 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.05□□□□□ -0.48
CopeO89079 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CopeO89079 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.05□□□□□ -0.48
CopeO89079 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CopeO89079 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
CopeO89079 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.05□□□□□ -0.48
CopeO89079 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CopeO89079 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CopeO89079 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CopeO89079 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms