Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chrna4O70174 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.82□□□□□ -0.52
Chrna4O70174 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chrna4O70174 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chrna4O70174 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Chrna4O70174 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Gm11663-201ENSMUST00000117888 290 ntBASIC11.82□□□□□ -0.52
Chrna4O70174 Gm8566-201ENSMUST00000120174 465 ntBASIC11.82□□□□□ -0.52
Chrna4O70174 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.82□□□□□ -0.52
Chrna4O70174 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chrna4O70174 Gm28450-201ENSMUST00000187349 638 ntBASIC11.82□□□□□ -0.52
Chrna4O70174 Gm5982-201ENSMUST00000196234 512 ntBASIC11.82□□□□□ -0.52
Chrna4O70174 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Chrna4O70174 Gm7940-201ENSMUST00000218195 769 ntBASIC11.82□□□□□ -0.52
Chrna4O70174 Lect2-202ENSMUST00000225183 823 ntBASIC11.82□□□□□ -0.52
Chrna4O70174 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Mir433-201ENSMUST00000093564 124 ntBASIC11.82□□□□□ -0.52
Chrna4O70174 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.82□□□□□ -0.52
Chrna4O70174 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.82□□□□□ -0.52
Chrna4O70174 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chrna4O70174 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Chrna4O70174 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 Gm23200-201ENSMUST00000104379 132 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm45575-201ENSMUST00000210283 548 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.81□□□□□ -0.52
Chrna4O70174 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Chrna4O70174 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Chrna4O70174 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chrna4O70174 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.81□□□□□ -0.52
Chrna4O70174 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chrna4O70174 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chrna4O70174 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Chrna4O70174 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chrna4O70174 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Chrna4O70174 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chrna4O70174 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chrna4O70174 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.8□□□□□ -0.52
Chrna4O70174 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chrna4O70174 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms