Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf13O54965 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf13O54965 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf13O54965 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf13O54965 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf13O54965 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rnf13O54965 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Erich3-203ENSMUST00000189969 3460 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Gm22018-201ENSMUST00000104357 131 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Gm11425-201ENSMUST00000119608 498 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Mospd4-201ENSMUST00000180618 576 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Gm27514-201ENSMUST00000183692 110 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.61□□□□□ -0.71
Rnf13O54965 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.61□□□□□ -0.71
Rnf13O54965 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Gm9396-201ENSMUST00000076703 567 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.61□□□□□ -0.71
Rnf13O54965 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf13O54965 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf13O54965 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.6□□□□□ -0.71
Rnf13O54965 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm11960-201ENSMUST00000122068 925 ntBASIC10.6□□□□□ -0.71
Rnf13O54965 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.6□□□□□ -0.71
Rnf13O54965 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Rnf13O54965 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.6□□□□□ -0.71
Rnf13O54965 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.6□□□□□ -0.71
Rnf13O54965 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.6□□□□□ -0.71
Rnf13O54965 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
Rnf13O54965 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf13O54965 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Rnf13O54965 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms