Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Raet1aO08602 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Raet1aO08602 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Raet1aO08602 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.41□□□□□ -0.74
Raet1aO08602 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.41□□□□□ -0.74
Raet1aO08602 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.41□□□□□ -0.74
Raet1aO08602 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Gm28071-201ENSMUST00000190355 478 ntBASIC10.41□□□□□ -0.74
Raet1aO08602 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.41□□□□□ -0.74
Raet1aO08602 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.41□□□□□ -0.74
Raet1aO08602 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.41□□□□□ -0.74
Raet1aO08602 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.41□□□□□ -0.74
Raet1aO08602 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Raet1aO08602 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm12380-201ENSMUST00000119012 544 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.4□□□□□ -0.74
Raet1aO08602 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.4□□□□□ -0.74
Raet1aO08602 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Raet1aO08602 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Raet1aO08602 Mir7677-201ENSMUST00000184226 67 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm28937-201ENSMUST00000185413 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm29400-201ENSMUST00000187208 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm28662-201ENSMUST00000188446 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm28251-201ENSMUST00000188835 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm37318-201ENSMUST00000194325 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm38117-201ENSMUST00000194653 939 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm38017-201ENSMUST00000194768 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm37287-201ENSMUST00000195449 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm37793-201ENSMUST00000195548 695 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm18038-201ENSMUST00000197900 485 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Rps4l-202ENSMUST00000204242 789 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Gm270-201ENSMUST00000223010 976 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Raet1aO08602 Gm26448-201ENSMUST00000082446 203 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.4□□□□□ -0.74
Raet1aO08602 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms