Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.03□□□□□ -0.48
AlyrefO08583 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.03□□□□□ -0.48
AlyrefO08583 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.03□□□□□ -0.48
AlyrefO08583 Gm37851-201ENSMUST00000193871 889 ntBASIC12.03□□□□□ -0.48
AlyrefO08583 Gm37197-201ENSMUST00000195607 401 ntBASIC12.03□□□□□ -0.48
AlyrefO08583 Gm20568-201ENSMUST00000197129 208 ntBASIC12.03□□□□□ -0.48
AlyrefO08583 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.03□□□□□ -0.48
AlyrefO08583 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.03□□□□□ -0.48
AlyrefO08583 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.03□□□□□ -0.48
AlyrefO08583 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Gm16380-201ENSMUST00000077997 478 ntBASIC12.03□□□□□ -0.48
AlyrefO08583 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AlyrefO08583 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
AlyrefO08583 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
AlyrefO08583 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
AlyrefO08583 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AlyrefO08583 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AlyrefO08583 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
AlyrefO08583 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AlyrefO08583 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
AlyrefO08583 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.02□□□□□ -0.48
AlyrefO08583 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
AlyrefO08583 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AlyrefO08583 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.02□□□□□ -0.48
AlyrefO08583 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
AlyrefO08583 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.02□□□□□ -0.49
AlyrefO08583 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.02□□□□□ -0.49
AlyrefO08583 Gm13117-201ENSMUST00000120894 691 ntBASIC12.02□□□□□ -0.49
AlyrefO08583 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC12.02□□□□□ -0.49
AlyrefO08583 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
AlyrefO08583 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.02□□□□□ -0.49
AlyrefO08583 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.02□□□□□ -0.49
AlyrefO08583 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Gm5455-201ENSMUST00000058710 715 ntBASIC12.02□□□□□ -0.49
AlyrefO08583 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
AlyrefO08583 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.02□□□□□ -0.49
AlyrefO08583 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
AlyrefO08583 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.02□□□□□ -0.49
AlyrefO08583 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.02□□□□□ -0.49
AlyrefO08583 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AlyrefO08583 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
AlyrefO08583 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AlyrefO08583 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms