Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn3aA2ASI5 Gm3329-201ENSMUST00000159873 556 ntBASIC12.98□□□□□ -0.33
Scn3aA2ASI5 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Scn3aA2ASI5 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.98□□□□□ -0.33
Scn3aA2ASI5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn3aA2ASI5 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.98□□□□□ -0.33
Scn3aA2ASI5 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.98□□□□□ -0.33
Scn3aA2ASI5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn3aA2ASI5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Gm12628-201ENSMUST00000122193 382 ntBASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Gm44008-201ENSMUST00000204345 412 ntBASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn3aA2ASI5 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.96□□□□□ -0.33
Scn3aA2ASI5 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scn3aA2ASI5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Gm25063-201ENSMUST00000104666 94 ntBASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Gm13117-201ENSMUST00000120894 691 ntBASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Gm19587-201ENSMUST00000191395 545 ntBASIC12.96□□□□□ -0.34
Scn3aA2ASI5 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Gm35960-201ENSMUST00000202712 767 ntBASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Gm5599-201ENSMUST00000209602 788 ntBASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn3aA2ASI5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Gm16219-201ENSMUST00000120096 274 ntBASIC12.95□□□□□ -0.34
Scn3aA2ASI5 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Gm9353-201ENSMUST00000200472 604 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms