Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Mir8093-201ENSMUST00000185043 137 ntBASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm6082-201ENSMUST00000215204 454 ntBASIC11.99□□□□□ -0.49
Tubb1A2AQ07 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tubb1A2AQ07 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gm26361-201ENSMUST00000158868 186 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Gm4157-201ENSMUST00000211647 679 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb1A2AQ07 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubb1A2AQ07 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb1A2AQ07 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb1A2AQ07 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tubb1A2AQ07 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb1A2AQ07 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms