Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm23912-201ENSMUST00000104687 87 ntBASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm15370-201ENSMUST00000117158 253 ntBASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm27501-201ENSMUST00000183599 107 ntBASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm37489-201ENSMUST00000191883 159 ntBASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm18935-201ENSMUST00000212692 664 ntBASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lima1Q9ERG0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Lima1Q9ERG0 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.58□□□□□ -0.55
Lima1Q9ERG0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Rgr-203ENSMUST00000225070 4704 ntBASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm24934-201ENSMUST00000103764 111 ntBASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.58□□□□□ -0.56
Lima1Q9ERG0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms