Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm12203-201ENSMUST00000118235 598 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm12209-201ENSMUST00000120089 596 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm16215-201ENSMUST00000161990 637 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm38241-201ENSMUST00000192641 898 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm18711-201ENSMUST00000199341 750 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm5904-201ENSMUST00000210286 865 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ssr3Q9DCF9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm15610-201ENSMUST00000120584 195 ntBASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm43575-201ENSMUST00000196420 516 ntBASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Gm22058-201ENSMUST00000083393 310 ntBASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ssr3Q9DCF9 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Ssr3Q9DCF9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ssr3Q9DCF9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms