Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm11700-201ENSMUST00000119409 403 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm18056-201ENSMUST00000207670 568 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm18061-201ENSMUST00000208350 562 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm18063-201ENSMUST00000208529 568 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm18052-201ENSMUST00000208750 559 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.43□□□□□ -0.42
Rpa3Q9CQ71 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gm12857-201ENSMUST00000117678 592 ntBASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms