Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm18054-201ENSMUST00000207539 555 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm9996-201ENSMUST00000070359 913 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim8Q99PJ2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm6013-201ENSMUST00000212264 699 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm19994-201ENSMUST00000217086 586 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm7399-201ENSMUST00000032395 858 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Olfr582-201ENSMUST00000098212 960 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms