Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.83□□□□□ -0.2
Hdac9Q99N13 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm14441-201ENSMUST00000121960 540 ntBASIC13.83□□□□□ -0.2
Hdac9Q99N13 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm18561-201ENSMUST00000206027 804 ntBASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.83□□□□□ -0.2
Hdac9Q99N13 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm14270-201ENSMUST00000118388 846 ntBASIC13.82□□□□□ -0.2
Hdac9Q99N13 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hdac9Q99N13 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.81□□□□□ -0.2
Hdac9Q99N13 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Gm5621-201ENSMUST00000187303 640 ntBASIC13.81□□□□□ -0.2
Hdac9Q99N13 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.81□□□□□ -0.2
Hdac9Q99N13 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.81□□□□□ -0.2
Hdac9Q99N13 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.81□□□□□ -0.2
Hdac9Q99N13 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.81□□□□□ -0.2
Hdac9Q99N13 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.81□□□□□ -0.2
Hdac9Q99N13 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hdac9Q99N13 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms