Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Mir1938-201ENSMUST00000158746 100 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Mir8109-201ENSMUST00000184375 117 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cstf3Q99LI7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Gm44651-201ENSMUST00000207343 372 ntBASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cstf3Q99LI7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cstf3Q99LI7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.35□□□□□ -0.59
Cstf3Q99LI7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms