Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Gm11500-201ENSMUST00000118237 601 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Gm15808-201ENSMUST00000119046 604 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Gm5714-201ENSMUST00000197343 566 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Gm18212-201ENSMUST00000211678 889 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb6Q91XZ4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm25881-201ENSMUST00000157783 103 ntBASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm2260-201ENSMUST00000184965 657 ntBASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm18730-201ENSMUST00000218038 343 ntBASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm10254-201ENSMUST00000052888 867 ntBASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb6Q91XZ4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb6Q91XZ4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb6Q91XZ4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdhb6Q91XZ4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb6Q91XZ4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms