Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim60Q8VI40 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.13□□□□□ -0.47
Trim60Q8VI40 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm11930-201ENSMUST00000117788 190 ntBASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm6963-201ENSMUST00000147879 379 ntBASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim60Q8VI40 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm14726-201ENSMUST00000120623 896 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm8062-201ENSMUST00000139696 444 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm5070-201ENSMUST00000177599 862 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm45598-202ENSMUST00000210719 986 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm18935-201ENSMUST00000212692 664 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm10478-201ENSMUST00000084451 396 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.12□□□□□ -0.47
Trim60Q8VI40 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim60Q8VI40 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms