Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps39Q8R5L3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm26286-201ENSMUST00000104166 134 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm13296-201ENSMUST00000117854 997 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm15004-201ENSMUST00000119192 630 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm11960-201ENSMUST00000122068 925 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm14381-201ENSMUST00000122105 414 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm43002-201ENSMUST00000200310 155 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps39Q8R5L3 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms