Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 AC124457.1-201ENSMUST00000198845 120 ntBASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gm19046-201ENSMUST00000221263 1298 ntBASIC15□□□□□ -0.01
Chmp7Q8R1T1 CT573047.1-201ENSMUST00000223652 851 ntBASIC15□□□□□ -0.01
Chmp7Q8R1T1 Lgi3-203ENSMUST00000226548 1001 ntBASIC15□□□□□ -0.01
Chmp7Q8R1T1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gm7114-201ENSMUST00000190159 1789 ntBASIC15□□□□□ -0.01
Chmp7Q8R1T1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm12030-201ENSMUST00000121917 223 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm23218-201ENSMUST00000158124 276 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm6407-201ENSMUST00000176468 549 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm5996-201ENSMUST00000211110 718 ntBASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp7Q8R1T1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm18561-201ENSMUST00000206027 804 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm17825-201ENSMUST00000206836 794 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms