Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.04□□□□□ -0.48
CopaQ8CIE6 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.04□□□□□ -0.48
CopaQ8CIE6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Gm28071-201ENSMUST00000190355 478 ntBASIC12.04□□□□□ -0.48
CopaQ8CIE6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.04□□□□□ -0.48
CopaQ8CIE6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm14263-201ENSMUST00000117955 746 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm43962-201ENSMUST00000203898 190 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm44100-201ENSMUST00000204329 436 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm44882-201ENSMUST00000205702 802 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm8959-201ENSMUST00000213150 571 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.03□□□□□ -0.48
CopaQ8CIE6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CopaQ8CIE6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopaQ8CIE6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopaQ8CIE6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopaQ8CIE6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopaQ8CIE6 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CopaQ8CIE6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms