Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Gm12058-201ENSMUST00000118614 437 ntBASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.63□□□□□ -0.55
Ccdc28bQ8CEG5 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm14441-201ENSMUST00000121960 540 ntBASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm7809-201ENSMUST00000153199 742 ntBASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm3890-201ENSMUST00000182416 207 ntBASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm37201-201ENSMUST00000191845 523 ntBASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc28bQ8CEG5 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28bQ8CEG5 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms