Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vps9d1Q8C190 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gm11222-201ENSMUST00000119005 738 ntBASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Morn2-202ENSMUST00000227729 656 ntBASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vps9d1Q8C190 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm24255-201ENSMUST00000104481 128 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm14381-201ENSMUST00000122105 414 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm25043-201ENSMUST00000158604 212 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm18056-201ENSMUST00000207670 568 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm18061-201ENSMUST00000208350 562 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm18063-201ENSMUST00000208529 568 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm18052-201ENSMUST00000208750 559 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm7619-201ENSMUST00000210649 1282 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm9004-201ENSMUST00000218739 1222 ntBASIC11□□□□□ -0.65
Vps9d1Q8C190 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11□□□□□ -0.65
Vps9d1Q8C190 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Vps9d1Q8C190 Gm9996-201ENSMUST00000070359 913 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms