Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm9192-201ENSMUST00000183221 985 ntBASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm27516-201ENSMUST00000184237 98 ntBASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm14644-201ENSMUST00000116671 647 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm43002-201ENSMUST00000200310 155 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.36□□□□□ -0.59
Rnf38Q8BI21 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf38Q8BI21 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms