Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm45433-201ENSMUST00000209386 247 ntBASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Gm18212-201ENSMUST00000211678 889 ntBASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ParpbpQ6IRT3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm24749-201ENSMUST00000157838 343 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm18893-201ENSMUST00000198416 943 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm8956-201ENSMUST00000203939 825 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm17827-201ENSMUST00000211825 742 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Gm8385-201ENSMUST00000058999 643 ntBASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ParpbpQ6IRT3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 221.7 ms