Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm12247-201ENSMUST00000117585 670 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm16071-201ENSMUST00000119589 793 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm10731-201ENSMUST00000181171 448 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm3508-201ENSMUST00000186012 792 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm17826-201ENSMUST00000189720 798 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm8342-201ENSMUST00000209839 757 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Snora73b-201ENSMUST00000083419 205 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.08□□□□□ -0.16
NfkbibQ60778 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
NfkbibQ60778 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NfkbibQ60778 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NfkbibQ60778 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Gm12029-201ENSMUST00000120073 832 ntBASIC14.07□□□□□ -0.16
NfkbibQ60778 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Gm44980-201ENSMUST00000205826 314 ntBASIC14.07□□□□□ -0.16
NfkbibQ60778 Gm9463-201ENSMUST00000206707 601 ntBASIC14.07□□□□□ -0.16
NfkbibQ60778 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.07□□□□□ -0.16
NfkbibQ60778 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.07□□□□□ -0.16
NfkbibQ60778 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.07□□□□□ -0.16
NfkbibQ60778 Lect2-202ENSMUST00000225183 823 ntBASIC14.07□□□□□ -0.16
NfkbibQ60778 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NfkbibQ60778 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.07□□□□□ -0.16
NfkbibQ60778 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.06□□□□□ -0.16
NfkbibQ60778 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NfkbibQ60778 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.06□□□□□ -0.16
NfkbibQ60778 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.06□□□□□ -0.16
NfkbibQ60778 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NfkbibQ60778 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NfkbibQ60778 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.06□□□□□ -0.16
NfkbibQ60778 Gm9089-201ENSMUST00000122027 526 ntBASIC14.06□□□□□ -0.16
NfkbibQ60778 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms