Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm24891-201ENSMUST00000104391 136 ntBASIC13.71□□□□□ -0.21
Prdm1Q60636 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Prdm1Q60636 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.71□□□□□ -0.21
Prdm1Q60636 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.71□□□□□ -0.21
Prdm1Q60636 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm23085-201ENSMUST00000157849 293 ntBASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm20426-201ENSMUST00000173657 440 ntBASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm8815-201ENSMUST00000173809 620 ntBASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm19353-201ENSMUST00000184561 445 ntBASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm38314-201ENSMUST00000195709 625 ntBASIC13.71□□□□□ -0.21
Prdm1Q60636 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.71□□□□□ -0.21
Prdm1Q60636 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Prdm1Q60636 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.71□□□□□ -0.21
Prdm1Q60636 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.71□□□□□ -0.21
Prdm1Q60636 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prdm1Q60636 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Prdm1Q60636 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Prdm1Q60636 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Prdm1Q60636 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.7□□□□□ -0.22
Prdm1Q60636 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Prdm1Q60636 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.7□□□□□ -0.22
Prdm1Q60636 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.7□□□□□ -0.22
Prdm1Q60636 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.7□□□□□ -0.22
Prdm1Q60636 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.7□□□□□ -0.22
Prdm1Q60636 Ntng1-201ENSMUST00000051253 327 ntBASIC13.7□□□□□ -0.22
Prdm1Q60636 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Prdm1Q60636 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.7□□□□□ -0.22
Prdm1Q60636 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.7□□□□□ -0.22
Prdm1Q60636 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prdm1Q60636 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Prdm1Q60636 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Prdm1Q60636 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm12165-201ENSMUST00000117047 342 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm11783-201ENSMUST00000119549 885 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Prdm1Q60636 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Gm5982-201ENSMUST00000196234 512 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.69□□□□□ -0.22
Prdm1Q60636 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.69□□□□□ -0.22
Prdm1Q60636 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prdm1Q60636 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms