Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkl5Q3UTQ8 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm12857-201ENSMUST00000117678 592 ntBASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm28686-201ENSMUST00000187404 609 ntBASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm7003-201ENSMUST00000195089 312 ntBASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkl5Q3UTQ8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Gm11663-201ENSMUST00000117888 290 ntBASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Gm14017-201ENSMUST00000121934 386 ntBASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Gm7940-201ENSMUST00000218195 769 ntBASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Gm18065-201ENSMUST00000221395 526 ntBASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkl5Q3UTQ8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdkl5Q3UTQ8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdkl5Q3UTQ8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Cdkl5Q3UTQ8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdkl5Q3UTQ8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkl5Q3UTQ8 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms