Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm19211-201ENSMUST00000200251 1206 ntBASIC11.92□□□□□ -0.5
Col9a1Q05722 Gm43671-201ENSMUST00000200422 433 ntBASIC11.92□□□□□ -0.5
Col9a1Q05722 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.92□□□□□ -0.5
Col9a1Q05722 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Col9a1Q05722 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.92□□□□□ -0.5
Col9a1Q05722 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a1Q05722 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a1Q05722 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a1Q05722 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Col9a1Q05722 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col9a1Q05722 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Col9a1Q05722 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.92□□□□□ -0.5
Col9a1Q05722 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a1Q05722 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm11191-201ENSMUST00000117231 610 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm12314-201ENSMUST00000118104 538 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm15982-201ENSMUST00000121681 554 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm25830-201ENSMUST00000158923 132 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm2541-201ENSMUST00000161209 711 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm18367-201ENSMUST00000176139 600 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm29548-201ENSMUST00000187012 694 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm28105-201ENSMUST00000187788 694 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm29543-201ENSMUST00000188138 967 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm37154-201ENSMUST00000192266 1290 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Ighv8-1-201ENSMUST00000194897 291 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm43815-201ENSMUST00000197676 990 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm43708-201ENSMUST00000198857 961 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 AC131117.1-201ENSMUST00000225154 1171 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 CT010505.1-201ENSMUST00000227026 396 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.91□□□□□ -0.5
Col9a1Q05722 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Col9a1Q05722 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a1Q05722 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms