Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm15198-201ENSMUST00000117283 177 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm14441-201ENSMUST00000121960 540 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm38317-201ENSMUST00000195564 343 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm43758-201ENSMUST00000199500 367 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm7783-201ENSMUST00000204795 781 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm4607-201ENSMUST00000206649 577 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn6Q03958 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.83□□□□□ -0.52
Pfdn6Q03958 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn6Q03958 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.82□□□□□ -0.52
Pfdn6Q03958 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Gm22133-201ENSMUST00000102082 109 ntBASIC11.82□□□□□ -0.52
Pfdn6Q03958 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.82□□□□□ -0.52
Pfdn6Q03958 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Gm45331-201ENSMUST00000209868 554 ntBASIC11.82□□□□□ -0.52
Pfdn6Q03958 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.82□□□□□ -0.52
Pfdn6Q03958 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn6Q03958 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.81□□□□□ -0.52
Pfdn6Q03958 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.81□□□□□ -0.52
Pfdn6Q03958 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm11700-201ENSMUST00000119409 403 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms