Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm11663-201ENSMUST00000117888 290 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm8566-201ENSMUST00000120174 465 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm12997-201ENSMUST00000120207 640 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm25881-201ENSMUST00000157783 103 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm28450-201ENSMUST00000187349 638 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.43□□□□□ -0.58
Mmp11Q02853 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm7940-201ENSMUST00000218195 769 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.43□□□□□ -0.58
Mmp11Q02853 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp11Q02853 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Mmp11Q02853 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm17040-202ENSMUST00000170597 889 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm27552-201ENSMUST00000183351 62 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm27844-201ENSMUST00000183613 62 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm29199-201ENSMUST00000187766 775 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.42□□□□□ -0.58
Mmp11Q02853 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp11Q02853 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.42□□□□□ -0.58
Mmp11Q02853 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms