Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.92□□□□□ -0.34
Lig3P97386 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.92□□□□□ -0.34
Lig3P97386 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 Mir6546-201ENSMUST00000184460 62 ntBASIC12.92□□□□□ -0.34
Lig3P97386 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.92□□□□□ -0.34
Lig3P97386 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Lig3P97386 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.92□□□□□ -0.34
Lig3P97386 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.92□□□□□ -0.34
Lig3P97386 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.92□□□□□ -0.34
Lig3P97386 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lig3P97386 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.91□□□□□ -0.34
Lig3P97386 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.91□□□□□ -0.34
Lig3P97386 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.91□□□□□ -0.34
Lig3P97386 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Gm14644-201ENSMUST00000116671 647 ntBASIC12.91□□□□□ -0.34
Lig3P97386 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.91□□□□□ -0.34
Lig3P97386 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Lig3P97386 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.91□□□□□ -0.34
Lig3P97386 Gm28324-201ENSMUST00000187913 264 ntBASIC12.91□□□□□ -0.34
Lig3P97386 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lig3P97386 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Lig3P97386 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.91□□□□□ -0.34
Lig3P97386 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.91□□□□□ -0.34
Lig3P97386 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lig3P97386 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lig3P97386 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.91□□□□□ -0.34
Lig3P97386 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lig3P97386 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.9□□□□□ -0.34
Lig3P97386 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.9□□□□□ -0.34
Lig3P97386 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.9□□□□□ -0.34
Lig3P97386 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm25880-201ENSMUST00000104331 132 ntBASIC12.9□□□□□ -0.34
Lig3P97386 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.9□□□□□ -0.34
Lig3P97386 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.9□□□□□ -0.34
Lig3P97386 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.9□□□□□ -0.34
Lig3P97386 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm37905-201ENSMUST00000195310 341 ntBASIC12.9□□□□□ -0.34
Lig3P97386 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.9□□□□□ -0.34
Lig3P97386 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.9□□□□□ -0.34
Lig3P97386 Gm10076-201ENSMUST00000073238 384 ntBASIC12.9□□□□□ -0.34
Lig3P97386 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm21811-201ENSMUST00000096485 930 ntBASIC12.9□□□□□ -0.34
Lig3P97386 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lig3P97386 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.9□□□□□ -0.34
Lig3P97386 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms