Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Gm11663-201ENSMUST00000117888 290 ntBASIC12.35□□□□□ -0.43
Rfx2P48379 Gm8566-201ENSMUST00000120174 465 ntBASIC12.35□□□□□ -0.43
Rfx2P48379 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Gm4034-201ENSMUST00000187674 480 ntBASIC12.35□□□□□ -0.43
Rfx2P48379 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.35□□□□□ -0.43
Rfx2P48379 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.35□□□□□ -0.43
Rfx2P48379 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.35□□□□□ -0.43
Rfx2P48379 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rfx2P48379 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.35□□□□□ -0.43
Rfx2P48379 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.35□□□□□ -0.43
Rfx2P48379 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfx2P48379 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rfx2P48379 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rfx2P48379 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rfx2P48379 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rfx2P48379 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rfx2P48379 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rfx2P48379 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rfx2P48379 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.34□□□□□ -0.43
Rfx2P48379 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rfx2P48379 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Gm14247-201ENSMUST00000120950 237 ntBASIC12.34□□□□□ -0.43
Rfx2P48379 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.34□□□□□ -0.43
Rfx2P48379 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rfx2P48379 Gm7467-201ENSMUST00000185173 652 ntBASIC12.34□□□□□ -0.43
Rfx2P48379 Gm37246-201ENSMUST00000192665 835 ntBASIC12.34□□□□□ -0.43
Rfx2P48379 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.34□□□□□ -0.43
Rfx2P48379 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.34□□□□□ -0.43
Rfx2P48379 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfx2P48379 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Rfx2P48379 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rfx2P48379 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Rfx2P48379 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.34□□□□□ -0.43
Rfx2P48379 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Rfx2P48379 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rfx2P48379 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx2P48379 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rfx2P48379 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfx2P48379 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfx2P48379 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Rfx2P48379 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Rfx2P48379 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfx2P48379 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rfx2P48379 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfx2P48379 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.33□□□□□ -0.44
Rfx2P48379 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
Rfx2P48379 Gm11509-201ENSMUST00000117358 325 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.33□□□□□ -0.44
Rfx2P48379 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.33□□□□□ -0.44
Rfx2P48379 Gm10051-201ENSMUST00000145209 414 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 Gm28686-201ENSMUST00000187404 609 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.33□□□□□ -0.44
Rfx2P48379 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 Ginm1-202ENSMUST00000065124 300 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.33□□□□□ -0.44
Rfx2P48379 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfx2P48379 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx2P48379 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.33□□□□□ -0.44
Rfx2P48379 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms