Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm23270-201ENSMUST00000104055 131 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm11511-201ENSMUST00000118146 540 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm11222-201ENSMUST00000119005 738 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm6963-201ENSMUST00000147879 379 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Gm8956-201ENSMUST00000203939 825 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Lect2-202ENSMUST00000225183 823 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.32□□□□□ -0.6
Tnfsf4P43488 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.32□□□□□ -0.6
Tnfsf4P43488 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfsf4P43488 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm8062-201ENSMUST00000139696 444 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm27572-201ENSMUST00000183702 255 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm18935-201ENSMUST00000212692 664 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.31□□□□□ -0.6
Tnfsf4P43488 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.31□□□□□ -0.6
Tnfsf4P43488 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfsf4P43488 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tnfsf4P43488 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.3□□□□□ -0.6
Tnfsf4P43488 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfsf4P43488 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfsf4P43488 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfsf4P43488 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfsf4P43488 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms