Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HttP42859 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HttP42859 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.1□□□□□ -0.47
HttP42859 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.1□□□□□ -0.47
HttP42859 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.1□□□□□ -0.47
HttP42859 Gm11960-201ENSMUST00000122068 925 ntBASIC12.1□□□□□ -0.47
HttP42859 Gm37597-201ENSMUST00000191853 382 ntBASIC12.1□□□□□ -0.47
HttP42859 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC12.1□□□□□ -0.47
HttP42859 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.1□□□□□ -0.47
HttP42859 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.1□□□□□ -0.47
HttP42859 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.1□□□□□ -0.47
HttP42859 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
HttP42859 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Mir8091-201ENSMUST00000183602 139 ntBASIC12.09□□□□□ -0.47
HttP42859 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.09□□□□□ -0.47
HttP42859 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
HttP42859 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC12.09□□□□□ -0.47
HttP42859 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.09□□□□□ -0.47
HttP42859 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
HttP42859 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.09□□□□□ -0.47
HttP42859 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 AC116596.1-201ENSMUST00000228112 1762 ntBASIC12.09□□□□□ -0.47
HttP42859 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HttP42859 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HttP42859 Gm6939-201ENSMUST00000122029 864 ntBASIC12.09□□□□□ -0.47
HttP42859 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC12.09□□□□□ -0.47
HttP42859 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.09□□□□□ -0.47
HttP42859 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HttP42859 Gm26379-201ENSMUST00000178125 138 ntBASIC12.09□□□□□ -0.47
HttP42859 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HttP42859 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.09□□□□□ -0.47
HttP42859 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
HttP42859 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
HttP42859 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.08□□□□□ -0.47
HttP42859 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Gm5510-201ENSMUST00000117826 486 ntBASIC12.08□□□□□ -0.48
HttP42859 Gm5764-201ENSMUST00000118817 885 ntBASIC12.08□□□□□ -0.48
HttP42859 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
HttP42859 Gm2328-201ENSMUST00000193525 535 ntBASIC12.08□□□□□ -0.48
HttP42859 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC12.08□□□□□ -0.48
HttP42859 Zfp389-202ENSMUST00000224437 1234 ntBASIC12.08□□□□□ -0.48
HttP42859 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
HttP42859 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HttP42859 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.08□□□□□ -0.48
HttP42859 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
HttP42859 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.08□□□□□ -0.48
HttP42859 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
HttP42859 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.08□□□□□ -0.48
HttP42859 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms