Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.88□□□□□ -0.19
Col3a1P08121 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col3a1P08121 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col3a1P08121 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.88□□□□□ -0.19
Col3a1P08121 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col3a1P08121 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.88□□□□□ -0.19
Col3a1P08121 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Col3a1P08121 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm8111-201ENSMUST00000117659 987 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Gm8302-201ENSMUST00000119217 852 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.87□□□□□ -0.19
Col3a1P08121 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Olfml3-204ENSMUST00000169286 874 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm37284-201ENSMUST00000193607 539 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.87□□□□□ -0.19
Col3a1P08121 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Gm13284-201ENSMUST00000121020 547 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.87□□□□□ -0.19
Col3a1P08121 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm18776-201ENSMUST00000188833 654 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col3a1P08121 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.87□□□□□ -0.19
Col3a1P08121 Gm5805-201ENSMUST00000072779 456 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Mir483-201ENSMUST00000093631 73 ntBASIC13.87□□□□□ -0.19
Col3a1P08121 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.86□□□□□ -0.19
Col3a1P08121 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.86□□□□□ -0.19
Col3a1P08121 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.86□□□□□ -0.19
Col3a1P08121 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col3a1P08121 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.86□□□□□ -0.19
Col3a1P08121 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col3a1P08121 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col3a1P08121 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col3a1P08121 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Col3a1P08121 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.86□□□□□ -0.19
Col3a1P08121 Gm17192-201ENSMUST00000169031 511 ntBASIC13.86□□□□□ -0.19
Col3a1P08121 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.86□□□□□ -0.19
Col3a1P08121 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.86□□□□□ -0.19
Col3a1P08121 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col3a1P08121 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms