Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Alx3O70137 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Gm45114-201ENSMUST00000208280 1349 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Gm23912-201ENSMUST00000104687 87 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Gm13744-201ENSMUST00000118953 850 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Gm14938-201ENSMUST00000119482 943 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Gm13740-201ENSMUST00000120590 310 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.95□□□□□ -0.66
Alx3O70137 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.95□□□□□ -0.66
Alx3O70137 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Gm20177-201ENSMUST00000203705 334 ntBASIC10.95□□□□□ -0.66
Alx3O70137 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.95□□□□□ -0.66
Alx3O70137 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Alx3O70137 Gm10617-201ENSMUST00000098368 1172 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.95□□□□□ -0.66
Alx3O70137 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Alx3O70137 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Alx3O70137 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx3O70137 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Alx3O70137 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.94□□□□□ -0.66
Alx3O70137 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Alx3O70137 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Alx3O70137 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Alx3O70137 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.94□□□□□ -0.66
Alx3O70137 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Alx3O70137 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.94□□□□□ -0.66
Alx3O70137 Gm10434-201ENSMUST00000101158 471 ntBASIC10.94□□□□□ -0.66
Alx3O70137 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Alx3O70137 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Gm11980-201ENSMUST00000121445 986 ntBASIC10.94□□□□□ -0.66
Alx3O70137 Gm13570-201ENSMUST00000140763 309 ntBASIC10.94□□□□□ -0.66
Alx3O70137 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Alx3O70137 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.94□□□□□ -0.66
Alx3O70137 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Gm39404-201ENSMUST00000216350 313 ntBASIC10.94□□□□□ -0.66
Alx3O70137 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC10.94□□□□□ -0.66
Alx3O70137 CT025526.1-201ENSMUST00000217327 267 ntBASIC10.94□□□□□ -0.66
Alx3O70137 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.94□□□□□ -0.66
Alx3O70137 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Alx3O70137 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx3O70137 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Alx3O70137 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.94□□□□□ -0.66
Alx3O70137 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms