Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Polr1aO35134 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Polr1aO35134 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Polr1aO35134 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC17.77■□□□□ 0.43
Polr1aO35134 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Polr1aO35134 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.76■□□□□ 0.43
Polr1aO35134 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Polr1aO35134 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm9372-201ENSMUST00000168454 430 ntBASIC17.76■□□□□ 0.43
Polr1aO35134 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Polr1aO35134 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Polr1aO35134 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm43506-201ENSMUST00000200675 753 ntBASIC17.76■□□□□ 0.43
Polr1aO35134 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm5822-201ENSMUST00000161562 1378 ntBASIC17.76■□□□□ 0.43
Polr1aO35134 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Gm42499-201ENSMUST00000196193 1412 ntBASIC17.76■□□□□ 0.43
Polr1aO35134 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr1aO35134 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm4917-201ENSMUST00000121452 650 ntBASIC17.75■□□□□ 0.43
Polr1aO35134 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm25226-201ENSMUST00000158198 123 ntBASIC17.75■□□□□ 0.43
Polr1aO35134 Gm25677-201ENSMUST00000174983 72 ntBASIC17.75■□□□□ 0.43
Polr1aO35134 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC17.75■□□□□ 0.43
Polr1aO35134 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.75■□□□□ 0.43
Polr1aO35134 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Polr1aO35134 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Polr1aO35134 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Polr1aO35134 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Polr1aO35134 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC17.75■□□□□ 0.43
Polr1aO35134 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC17.75■□□□□ 0.43
Polr1aO35134 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Gm14005-208ENSMUST00000223654 681 ntBASIC17.75■□□□□ 0.43
Polr1aO35134 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr1aO35134 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC17.74■□□□□ 0.43
Polr1aO35134 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC17.74■□□□□ 0.43
Polr1aO35134 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Polr1aO35134 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Polr1aO35134 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr1aO35134 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms