Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm26286-201ENSMUST00000104166 134 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh9F8VPK8 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Gm11660-201ENSMUST00000120955 412 ntBASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Gm32999-201ENSMUST00000192693 562 ntBASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Rprl1-202ENSMUST00000198476 238 ntBASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh9F8VPK8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh9F8VPK8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms