Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube4aE9Q735 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm13422-201ENSMUST00000118834 504 ntBASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.07□□□□□ -0.16
Ube4aE9Q735 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm43163-201ENSMUST00000196571 442 ntBASIC14.07□□□□□ -0.16
Ube4aE9Q735 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm18561-201ENSMUST00000206027 804 ntBASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube4aE9Q735 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm42816-201ENSMUST00000198433 325 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Gm30671-201ENSMUST00000214898 318 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ube4aE9Q735 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4aE9Q735 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.06□□□□□ -0.16
Ube4aE9Q735 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm13117-201ENSMUST00000120894 691 ntBASIC14.05□□□□□ -0.16
Ube4aE9Q735 Gm10169-201ENSMUST00000121822 348 ntBASIC14.05□□□□□ -0.16
Ube4aE9Q735 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms