Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Herc1E9PZP8 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Herc1E9PZP8 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm12716-201ENSMUST00000120606 1354 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Mir6239-201ENSMUST00000183564 105 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm28937-201ENSMUST00000185413 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm29400-201ENSMUST00000187208 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm28662-201ENSMUST00000188446 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm28251-201ENSMUST00000188835 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm37318-201ENSMUST00000194325 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm38017-201ENSMUST00000194768 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm37287-201ENSMUST00000195449 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm37793-201ENSMUST00000195548 695 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm18118-201ENSMUST00000201064 645 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm7812-201ENSMUST00000203479 874 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 AC154585.1-201ENSMUST00000218917 997 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm18749-201ENSMUST00000222410 692 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm5766-201ENSMUST00000160520 1977 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Il17rd-203ENSMUST00000225146 3366 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm7539-201ENSMUST00000189789 630 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm37643-201ENSMUST00000195369 1260 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm15580-201ENSMUST00000121587 556 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm16077-201ENSMUST00000121915 655 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm17931-201ENSMUST00000208132 634 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Gm25514-201ENSMUST00000083860 135 ntBASIC6.33□□□□□ -1.4
Herc1E9PZP8 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Herc1E9PZP8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms