Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 AC154354.1-203ENSMUST00000225565 1364 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm14113-201ENSMUST00000121399 976 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm37284-201ENSMUST00000193607 539 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm43244-201ENSMUST00000196994 1285 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm42660-201ENSMUST00000197733 947 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm42751-201ENSMUST00000198065 559 ntBASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
Scaf11E9PZM7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm37014-201ENSMUST00000194723 2253 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm23647-201ENSMUST00000175042 109 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Rn5s-201ENSMUST00000177555 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s108-201ENSMUST00000177575 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s121-201ENSMUST00000177589 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s146-201ENSMUST00000177889 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm22109-201ENSMUST00000177995 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm22291-201ENSMUST00000178027 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s141-201ENSMUST00000178066 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm23284-201ENSMUST00000178069 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s100-201ENSMUST00000178106 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s111-201ENSMUST00000178203 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s105-201ENSMUST00000178499 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s149-201ENSMUST00000178520 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s103-201ENSMUST00000178755 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s123-201ENSMUST00000178804 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s142-201ENSMUST00000178820 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s144-201ENSMUST00000178859 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s139-201ENSMUST00000178975 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s134-201ENSMUST00000178983 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s136-201ENSMUST00000179080 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm25018-201ENSMUST00000179081 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s104-201ENSMUST00000179107 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s113-201ENSMUST00000179143 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s133-201ENSMUST00000179275 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s117-201ENSMUST00000179431 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm25212-201ENSMUST00000179432 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s138-201ENSMUST00000179476 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s122-201ENSMUST00000179500 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s143-201ENSMUST00000179542 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s107-201ENSMUST00000179704 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm26391-201ENSMUST00000179843 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s110-201ENSMUST00000179995 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s128-201ENSMUST00000180096 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 n-R5s124-201ENSMUST00000180334 119 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 AC121567.1-201ENSMUST00000227213 842 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Gm24089-201ENSMUST00000093696 109 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Map1b-203ENSMUST00000223725 2669 ntBASIC16.15■□□□□ 0.18
Scaf11E9PZM7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms