Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm11783-201ENSMUST00000119549 885 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm11836-201ENSMUST00000121022 441 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm24844-201ENSMUST00000158679 127 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm6485-201ENSMUST00000160676 439 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Mir8115-201ENSMUST00000184992 119 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm37299-201ENSMUST00000193951 826 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm44506-201ENSMUST00000206278 965 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Srp54bE9PXC0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gm43852-201ENSMUST00000202098 917 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gm44980-201ENSMUST00000205826 314 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gm7940-201ENSMUST00000218195 769 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srp54bE9PXC0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms