Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm11942-201ENSMUST00000180255 345 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm42660-201ENSMUST00000197733 947 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm6564-201ENSMUST00000075377 619 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Mir744-201ENSMUST00000103261 100 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm15136-201ENSMUST00000120552 533 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm7627-201ENSMUST00000183205 999 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm7238-201ENSMUST00000206467 973 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm7589-201ENSMUST00000085631 534 ntBASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col4a6B1AVK5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm12418-201ENSMUST00000118116 942 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm22344-201ENSMUST00000122642 278 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm23647-201ENSMUST00000175042 109 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Rn5s-201ENSMUST00000177555 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms