Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gm19994-201ENSMUST00000217086 586 ntBASIC10.62□□□□□ -0.71
H2afb3S4R1G7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm25214-201ENSMUST00000104573 129 ntBASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm15370-201ENSMUST00000117158 253 ntBASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm11989-201ENSMUST00000117240 672 ntBASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm11362-201ENSMUST00000118838 850 ntBASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm15547-201ENSMUST00000122152 333 ntBASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H2afb3S4R1G7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm11222-201ENSMUST00000119005 738 ntBASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm5419-201ENSMUST00000119301 527 ntBASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm8062-201ENSMUST00000139696 444 ntBASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm27572-201ENSMUST00000183702 255 ntBASIC10.6□□□□□ -0.71
H2afb3S4R1G7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms