Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm14644-201ENSMUST00000116671 647 ntBASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm9794-201ENSMUST00000202370 423 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.66□□□□□ -0.54
Ssu72Q9CY97 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm11511-201ENSMUST00000118146 540 ntBASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm12490-201ENSMUST00000120255 560 ntBASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm5370-201ENSMUST00000187187 574 ntBASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm9230-201ENSMUST00000188228 532 ntBASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms