Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm807-202ENSMUST00000224929 408 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm26232-201ENSMUST00000083360 166 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm23912-201ENSMUST00000104687 87 ntBASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm12928-201ENSMUST00000117115 573 ntBASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm23119-201ENSMUST00000158610 140 ntBASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
RTRAFQ9CQE8 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
RTRAFQ9CQE8 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
RTRAFQ9CQE8 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
RTRAFQ9CQE8 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
RTRAFQ9CQE8 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms