Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Gm12419-201ENSMUST00000116649 636 ntBASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Prpf8Q99PV0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm24891-201ENSMUST00000104391 136 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm11246-201ENSMUST00000120880 345 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm15566-201ENSMUST00000121130 590 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm42657-201ENSMUST00000201746 211 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm19091-201ENSMUST00000208120 978 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm3619-201ENSMUST00000219947 775 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm9645-201ENSMUST00000197131 792 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Prpf8Q99PV0 Gm5434-202ENSMUST00000222384 1451 ntBASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Gm5434-201ENSMUST00000071825 1451 ntBASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Gm14585-201ENSMUST00000120713 634 ntBASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Mir483-201ENSMUST00000093631 73 ntBASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Prpf8Q99PV0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.67□□□□□ -0.86
Prpf8Q99PV0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms