Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Gm43002-201ENSMUST00000200310 155 ntBASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm15198-201ENSMUST00000117283 177 ntBASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm25700-201ENSMUST00000177693 110 ntBASIC13.4□□□□□ -0.26
Trim11Q99PQ2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm21156-201ENSMUST00000189693 869 ntBASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm43179-201ENSMUST00000198797 275 ntBASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm45224-201ENSMUST00000208203 414 ntBASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim11Q99PQ2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim11Q99PQ2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gm22323-201ENSMUST00000103832 109 ntBASIC13.39□□□□□ -0.27
Trim11Q99PQ2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gm27320-201ENSMUST00000184892 109 ntBASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms