Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm7722-201ENSMUST00000120646 741 ntBASIC11.56□□□□□ -0.56
Trim8Q99PJ2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Mir6420-201ENSMUST00000185032 102 ntBASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm37008-201ENSMUST00000195712 319 ntBASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm45331-201ENSMUST00000209868 554 ntBASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim8Q99PJ2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm6023-201ENSMUST00000118217 606 ntBASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm18711-201ENSMUST00000199341 750 ntBASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm9823-201ENSMUST00000051212 327 ntBASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim8Q99PJ2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms