Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm12990-201ENSMUST00000120372 468 ntBASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm12030-201ENSMUST00000121917 223 ntBASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm42816-201ENSMUST00000198433 325 ntBASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm18561-201ENSMUST00000206027 804 ntBASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm11801-201ENSMUST00000117807 746 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm3726-201ENSMUST00000203110 785 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm18059-201ENSMUST00000208073 580 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.87□□□□□ -0.51
Smarcd2Q99JR8 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd2Q99JR8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smarcd2Q99JR8 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.86□□□□□ -0.51
Smarcd2Q99JR8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd2Q99JR8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd2Q99JR8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd2Q99JR8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd2Q99JR8 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms